Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015906638.1_cds_XP_016456795.1_50596
CDS Infomation

[gene=LOC107780731] [db_xref=GeneID:107780731] [protein=probable glycosyltransferase At5g25310] [protein_id=XP_016456795.1] [location=join(79693..80019,80479..80606,83168..83519,83832..84524)] [gbkey=CDS]
Sequence

ATGATGATTTTAAAAAAAAGTAGTGATAATGAAGGTGGTAGTAGTGGTGGTGGTGGTGGT
GGAGGAGGAGGAGTACTTTATGCTTATTTAGGTATACTCTGTTGTGTACTTGTTGTATCA
GTGATAGCAGTTTTTCTCGGAAGCGGCTTCCGATCATCGGCGGTTGCCGTGAATTCAGGT
AGTACTGTTTCGATCGTTGAGTTGCAGAAGAAAGTGATCGCCGCTACCGTGGCTAATCTA
AATCCATCACGAGCCATCGCTTCTGATGTTTCGTTATACCGGAAGAACTCTTCGTTCTCT
CCGATTCAGAGAAAATCTGCCGTTGTTAGGAAAGTTGATAAGAATGAGGAAGGATTGACA
CGAGCGAGAGCGGCGATTCGAAAAGCTGCTGGTGTTCGAAATCAGTCGATCATAAACCCC
GGTGGAATCTACCGTAATCCAGGCGCATTTTATCAGAGTTACAAGGAGATGGAGAGGAGA
TTCAAAGTGTATGTATATGAAGATGGAGACTTCATAATAGTCCATAATGGACCCTGTAAA
GATATATATGCAAGTGAAGGAAGGTTCATTAGCGAGATGGAACATGGTAACAGTAAATTC
AGGACAAGAGACCCTCATTCAGCCCATGTTTATTTCATGCCTTTTAGTGTAACTTGGATG
GTTAAGTTTCTCTACAAGCCACTTTCATATAACGTTACTCCTCTTAAAGAGTTTGTGTCT
GATTATGTTCGACTTATCTCAACAAAATACCCGTTCTGGAATCGAAGTCATGGAGCTTAT
CATTTCATGCTTTCTTGCCATGATTGGGCTCCTCTTGCTTCAAAAGGCAATGATTTTCTG
TACAATACATCAATAAGGGTTTTGTGTAATGCAAACTCCTCAGAAGGTTTCAATCCTCAG
AAAGATGTGAGCCTTCCTGAAATCTACCTTTACAATGGTGTAGTATCCCCAAAGCTACAA
TCTCCTCCTCCAGCCAACATTTCAAGGCCTTATCTTGGATTCTTTGCTGGTGGACTTCAT
GGCGATATCCGGAAAAACCTCTTCGAACACTGGAAAGGGAAAGACTCCGATCTTCGTGTA
TATGAATACTTGCCTAAAGACATGGATTATCCCTCNTACTTGCCTAAATACATGGATTAT
CCCTCTGAATTGTTGAGGTCCAAGTTTTGCCTATGCCCCAGTGGCTATGAAGTGGCTAGC
CCAAGAGCGGTTGAAGCAATTTATGCCGAATGTGTTCCTGTTATGTTATCAGATCATTAC
GTCTTCCCTTTTAGTGATGTGCTAAACTGGGATGCATTCTCAATACAGGTTAACATTTCT
GATATCCCAAGGCTAAAGGAGATATTGTTGGCTATTCCAGAAGACAAATACATGAAGCTC
AAAGAAGGTTTGAGAGCTGTGAGGAAACATTTTGAACTAAACCGGCCTGCTCTGAAGTTT
GATGTGTTTCATATGATATTACACTCTATATGGCTCAGGAGACTAAATTTAAGGCTCTAG

Peptide Sequence

PEP ID

XP_016456795.1
PEP Infomation

PREDICTED: probable glycosyltransferase At5g25310 [Nicotiana tabacum]
Sequence

MMILKKSSDNEGGSSGGGGGGGGGVLYAYLGILCCVLVVSVIAVFLGSGFRSSAVAVNSG
STVSIVELQKKVIAATVANLNPSRAIASDVSLYRKNSSFSPIQRKSAVVRKVDKNEEGLT
RARAAIRKAAGVRNQSIINPGGIYRNPGAFYQSYKEMERRFKVYVYEDGDFIIVHNGPCK
DIYASEGRFISEMEHGNSKFRTRDPHSAHVYFMPFSVTWMVKFLYKPLSYNVTPLKEFVS
DYVRLISTKYPFWNRSHGAYHFMLSCHDWAPLASKGNDFLYNTSIRVLCNANSSEGFNPQ
KDVSLPEIYLYNGVVSPKLQSPPPANISRPYLGFFAGGLHGDIRKNLFEHWKGKDSDLRV
YEYLPKDMDYPSYLPKYMDYPSELLRSKFCLCPSGYEVASPRAVEAIYAECVPVMLSDHY
VFPFSDVLNWDAFSIQVNISDIPRLKEILLAIPEDKYMKLKEGLRAVRKHFELNRPALKF
DVFHMILHSIWLRRLNLRL

Transcript Sequence

Gene sequence data has not been registered.